(218d) A Simple Method for Incorporating Prior Parameter Information during Model-Based D-Optimal Design of Experiments in Pharmaceutical Production
AIChE Annual Meeting
2024
2024 AIChE Annual Meeting
Pharmaceutical Discovery, Development and Manufacturing Forum
Advances in Control Strategy using Modeling Tools and Approaches
Monday, October 28, 2024 - 4:24pm to 4:42pm
For nonlinear models with many unknown parameters, computation of MBDoE objective functions is a challenge due to a singular Fisher information matrix (FIM).4,5,6 Several methods have been developed to overcome the problem of a singular FIM, such as parameter-subset selection4 and Bayesian approaches.5 Unfortunately, closed-form objective functions for Bayesian MBDoE are difficult to obtain.7 Therefore, sampling-based approaches, such as Markov chain Monte Carlo (MCMC) methods, are typically used for Bayesian MBDoE.8,9 However, these methods tend to be complex to understand and require excessive computation for large models, such as many chemical and pharmaceutical process models.8
In this study, we propose a simplified linearization-based Bayesian D-optimal objective function for MBDoE in multi-response nonlinear models. The proposed objective function will be useful for modelers who want to design new experiments to obtain better parameter estimates for nonlinear pharmaceutical process models with many unknown parameters. We also developed a new method to test the effectiveness of experimental design methods for nonlinear models in a D-optimal sense. This new method relies on the computation of the volumes of minimum volume ellipsoids (MVEs) that are centered at the true parameter values. The proposed MVE methodology will be helpful to future researchers who want to compare the effectiveness of different experimental design methods aimed at achieving accurate parameter estimates and model predictions used for mapping of permissible operating regions.
A pharmaceutical case study is used to illustrate and test the proposed Bayesian D-optimal objective function for designing new experiments. This case study involves a nonlinear dynamic model of a batch reactor with Michaelis-Menten kinetics, which is used for the production of a pharmaceutical product.10 Initially, only four replicate runs are available to estimate the 14 unknown parameters (kinetic rate constants and activation energies). The proposed simple Bayesian D-optimal objective function is used to design two new experiments in a variety of ways: two experiments one-at-a-time and two experiments at-the-same-time. We confirm that, as new D-optimal experiments are included in parameter estimation, the MVE of the resulting parameter estimates gets smaller. We also use a similar Bayesian A-optimal objective function, developed in a previous study5, to design new A-optimal experiments. We show that estimates from D-optimal experiments have a much smaller MVE than corresponding estimates from A-optimal experiments or randomly-selected corner-point experiments. As a result, we confirm that the proposed Bayesian D-optimal objective function is effective in a D-optimal sense. We anticipate that the proposed Bayesian D-optimal methodology will be useful to a wide variety of modelers who develop pharmaceutical models with a large number of parameters, because of its computational simplicity relative to MCMC-based methods. When planning new experiments, future modelers will be able to readily account for prior beliefs about plausible parameter values, the structure of their model equations, and old data that may be available.
References
- Maria G. A review of algorithms and trends in kinetic model identification for chemical and biochemical systems. Chemical and Biochemical Engineering Quarterly. 2004;18:195-222.
- McLean KAP, McAuley KB. Mathematical modelling of chemical processes â obtaining the best model predictions and parameter estimates using identifiability and estimability procedures. The Canadian Journal of Chemical Engineering. 2012;90:351-366.
- Box GE, Lucas HL. Design of experiments in non-linear situations. Biometrika. 1959;46:77-90.
- Thompson DE, McAuley KB, McLellan PJ. Design of optimal sequential experiments to improve model predictions from a polyethylene molecular weight distribution model. Macromolecular Reaction Engineering. 2010;4:73-85.
- Shahmohammadi A, McAuley KB. Using prior parameter knowledge in model-based design of experiments for pharmaceutical production. AIChE Journal. 2020;66:e17021.
- Walz O, Djelassi H, Mitsos A. Optimal experimental design for optimal process design: A trilevel optimization formulation. AIChE Journal. 2020;66:e16788.
- Chaloner K, Verdinelli I. Bayesian experimental design: A review. Statistical Science. 1995;10:273-304.
- Ryan EG, Drovandi CC, Pettitt AN. Simulation-based fully Bayesian experimental design for mixed effects models. Computational Statistics and Data Analysis. 2015;92:26-39.
- Kalyanaraman J, Kawajiri Y, Realff MJ. Bayesian design of experiments for adsorption isotherm modeling. Computers and Chemical Engineering. 2020;135:106774.
- Domagalski NR, Mack BC, Tabora JE. Analysis of design of experiments with dynamic responses. Organic Process Research & Development. 2015;19:1667-1682.