(285d) Quantitative, Multi-Scale Modeling Using Qualitative Data Identifies a Plant-Specific Dual Role for Hops in Regulated Vacuole Fusion
AIChE Annual Meeting
2019
2019 AIChE Annual Meeting
Food, Pharmaceutical & Bioengineering Division
Multiscale Systems Biology
Tuesday, November 12, 2019 - 8:54am to 9:12am
To resolve a counter-intuitive observation regarding the role of HOPS in regulating vacuole morphology, we derived a quantitative model of vacuole fusion dynamics and used it to generate testable predictions about HOPS-SNARE interactions. We derived our model from limited - and, initially, qualitative - data by integrating statistical inference with quantitative fluorescence imaging and mechanistic modeling. The dynamic model predicted the evolution of vacuole morphology as it arises from intra-cellular signaling events that include: cytosol-to-membrane recruitment, chaperoned protein complexation, and complex disassembly.
By constraining the model parameters to yield the emergent outcomes observed for stoma opening (as induced by two distinct signals), we predicted a dual role for HOPS and identified a stalled form of the SNARE complex that differs from phenomena reported in yeast. We predict that HOPS has apparently contradictory actions at different points in the fusion signaling pathway, promoting the formation of SNARE complexes, but limiting their activity.