(681f) Paired Simulations and Experimental Investigations into the Calcium-Dependent Bioactivity of Albumin
AIChE Annual Meeting
2019
2019 AIChE Annual Meeting
Food, Pharmaceutical & Bioengineering Division
Computational Approaches to Protein Engineering
Thursday, November 14, 2019 - 2:00pm to 2:18pm
Experimentally, it was found that bovine albumin coated substrates facilitate MC3T3-E1 osteoblast-like cell adhesion only after they have been exposed to calcium containing buffer. The cell adhesion levels further increase with increasing calcium concentrations. These experimental results are explained through a series of atomistic and coarse-grained molecular dynamics (MD) simulations to understand the Ca2+ ion dependent conformational changes that occur in the three-dimensional structure of albumin. Atomistic MD simulations in the presence and absence of docked Ca2+ ions were first performed to identify the local conformational changes. Coarse-grained MD simulations were then performed to investigate large scale conformational changes and the effect of varying Ca2+ ion concentrations in the bulk of the simulation box on the albumin conformation. In our preliminary analysis, we were able to identify the regions on the albumin structure undergoing conformational changes. Moreover, we observed that 0.5 M Ca2+ ion concentration had a significantly larger stabilizing effect on albumin conformation than 0.1 M Ca2+ ion concentration. These preliminary simulation results are in agreement with the experiments, where higher Ca2+ ion concentrations were found to be stabilizing the albumin conformation and also provide evidence of Ca2+ ion concentration dependent conformational changes.