Lydia Contreras

Citation name

Contreras, L.

Affiliation

The University of Texas at Austin

State

TX

Country

USA

Sessions chaired or co-chaired

Biomolecular Engineering

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

Biomolecules at Interfaces

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

Emerging Tools for Synthetic Biology

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

Precision Medicine, Big Data, and Chemical Engineering

2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)

Authored

Machine-Based Learning for Rational Engineering of Biomolecular Libraries

Lydia Contreras

Jorge Vasquez

Kris Reyes

5th ICBE - International Conference on Biomolecular Engineering

Genome-Wide Search for Intracellular Factors Affecting RNA Folding Via in Vivo Oligonucleotide Hybridization

Kevin Vasquez

Jorge Vazquez-Anderson

Taylor Hatridge

Lydia Contreras

5th ICBE - International Conference on Biomolecular Engineering

(69g) Exploiting Structural Effects of Post-Transcriptional RNA Modifications to Engineer Orthogonality of Amber Suppressor Transfer RNAs for Genetic Code Expansion

2016 AIChE Annual Meeting (ISBN: 978-0-8169-1097-7)

(598e) A Novel Four-Dimensional Omics Approach for Mapping Large Targetomes of Global Regulatory Networks

2016 AIChE Annual Meeting (ISBN: 978-0-8169-1097-7)

(87f) Rational Modular Engineering of a Global RNA Regulator for Tunable Metabolic Control

2016 AIChE Annual Meeting (ISBN: 978-0-8169-1097-7)

(707d) Enhancing Protein Solubility By Rationally Programming Co-Translational Folding Using Synonymous Codons

Lydia Contreras

Kevin Vasquez

2016 AIChE Annual Meeting (ISBN: 978-0-8169-1097-7)

(646e) Integrating Multiple Omics Studies to Uncover Underlying Post-Transcriptional Regulatory Networks

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

(676c) Constructing a General Bioinformatics Pipeline to Identify Regulatory Mechanisms That Improve Ethanol Tolerance in Zymomonas Mobilis

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

(598b) Understanding Accessibility for Targeting Nucleic Acids in Living Cells Via a Thermo-Kinetic Model of in Vivo Oligonucleotide Hybridization

Jorge Vazquez-Anderson

2015 AIChE Annual Meeting Proceedings (ISBN: 978-0-8169-1094-6)

(190as) Biophysical Model of CsrA-mRNA Interactions Expands Canonical Understanding of the CsrA Global Regulator Protein

2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)

(597d) Utilizing Native Metabolic Pathways in Deinococcus Radiodurans for Metallic Nanoparticle Biosynthesis

Angela Chen

Lydia Contreras

Benjamin Keitz

2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)

(361c) Computational High-Throughput Screening of Modified RNA Interactions with Proteins

Asuka A. Orr

Juan Camilo Gonzalez Rivera

Lydia Contreras

Phanourios Tamamis

2018 AIChE Annual Meeting (ISBN: 978-0-8169-1108-0)

Tracking RNA modifications to understand early health effects of oxidative-prone air

Lydia Contreras

Juan Camilo Gonzalez Rivera

2nd Epigenetics and Bioengineering Conference (EpiBio 2018)

(681e) Computational Protein Design Targeting Oxidized RNA Modifications

Asuka A. Orr

Juan Camilo Gonzalez Rivera

2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)

(222a) Tracking Epitranscriptomics Modifications to Understand Early Health Effects of Oxidative-Prone Air

Lydia Contreras

Juan Camilo Gonzalez Rivera

2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)

(790d) Epitranscriptomics of RNA oxidation reveals mechanisms of lung toxicity and disease

Juan Camilo Gonzalez Rivera

Lydia Contreras

2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)

The Tryptophan-Induced tnaC Ribosome Stalling Sequence Exposes High Amino Acid Cross-Talk That Can be Mitigated By Removal of NusB for Higher Orthogonality

Mark Sherman

Lydia Contreras

Sanjna Sandeep

2021 Synthetic Biology: Engineering, Evolution & Design (SEED)

Application of Natural RNA Regulators to Tune Biosynthesis of Nanoparticles for Enhanced Material and Functional Properties

Angela Chen

Julia Hernandez-Vargas

Runhua Han

Orlando Cortazar-Martinez

Natalia Gonzalez

Sonia Patel

Benjamin Keitz

Gabriel Luna-Barcenas

Lydia Contreras

2021 Synthetic Biology: Engineering, Evolution & Design (SEED)

(369b) Using RNAs as a built-in sensors of cell biology

Lydia Contreras

2021 Annual Meeting (ISBN: 978-0-8169-1116-5)

(694c) Coupled Quantitative Transcriptomic and High-Throughput Morphological Analysis Predict Biological Effects of Environmental Toxins on Human Lung Cells

2022 Annual Meeting (ISBN: 978-0-8169-1118-9)

(27bl) Leveraging the Carbon Storage Regulatory Network to engineer Complex Post-Transcriptional Gene Circuits

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(405e) Tracking Air Pollution Induced RNA Oxidation Using an Improved Biochemical Methodology

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(648a) Coupled Experimental and Bioinformatic Approach Elucidates Transcriptional Regulators of Small Non-Coding RNAs in Pathogens

Alyssa Ekdahl

Peter Freddolino

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(635f) Epitranscriptomic Regulation Changes in Human Lung Cells in Response to Environmental Stresses.

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(27ad) 8-Oxo-7,8-Dihydroguanosine Alters RNA Degradation Behavior of Polynucleotide Phosphorylase

Juan Camilo Gonzalez Rivera

Marino Resendiz

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(337cb) A Systems Biology Approach to Understanding Environmental Stress Responses in Human Lung Cells

Lydia Contreras

Sean Engels

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(337an) Stress Responsive Small Non-Coding RNA Networks in Mycobacteria revealed By Coupled Experimental and Bioinformatic Approach

Alyssa Ekdahl

Peter Freddolino

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(337ao) 8-Oxo-7,8-Dihydroguanosine Alters RNA Enzymatic Degradation Behavior of Polynucleotide Phosphorylase

Juan Camilo Gonzalez Rivera

Marino Resendiz

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(405g) Invited Talk: Characterizing Biosensors of Nucleic Acid Oxidative Stress

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

(618g) Invited Talk: Novel Systems-Based Approaches for Characterizing Regulatory RNAs and Their Overlapping Networks in Bacteria

Lydia Contreras

2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)

Associated proceedings

5th ICBE - International Conference on Biomolecular Engineering

2016 AIChE Annual Meeting

2015 AIChE Annual Meeting Proceedings

2018 AIChE Annual Meeting

2nd Epigenetics and Bioengineering Conference (EpiBio 2018)

2019 AIChE Annual Meeting

2021 Synthetic Biology: Engineering, Evolution & Design (SEED)

2021 Annual Meeting

2022 Annual Meeting

2023 AIChE Annual Meeting

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2025 AIChE Annual Meeting

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Lydia Contreras

Contreras, L.

The University of Texas at Austin

TX

USA

Sessions chaired or co-chaired

Authored

Associated proceedings